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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs67101035 chr6:27798887 C/G ZFP57 chr6:29640169-29648887:- 0.89 8.31 9.86E-16 Box Plot
THCA rs67101804 chr5:121199091 T/C ATP10A chr15:25922420-26110319:- 0.37 5.88 7.73E-9 Box Plot
THCA rs6710910 chr2:101157387 G/A LOC285359 chr3:101431278-101432259:+ 0.31 6.11 2.13E-9 Box Plot
THCA rs6711180 chr2:113023302 C/G RGPD5 chr2:110550335-110615272:+ -0.49 -7.13 3.85E-12 Box Plot
THCA rs67112545 chr2:132192769 A/T CCDC74B chr2:130896860-130902707:- 0.37 6.57 1.29E-10 Box Plot
THCA rs671150 chr17:15571869 T/C ZNF286B chr17:18561742-18585575:- 0.69 13.45 3.52E-35 Box Plot
THCA rs6711604 chr2:132254367 A/G CCDC74B chr2:130896860-130902707:- 0.39 6.87 1.98E-11 Box Plot
THCA rs6711731 chr2:132254486 A/G CCDC74B chr2:130896860-130902707:- 0.4 7.15 3.26E-12 Box Plot
THCA rs6711982 chr2:132254681 A/G CCDC74B chr2:130896860-130902707:- 0.39 6.93 1.4E-11 Box Plot
THCA rs6712682 chr2:151924527 A/T COG8 chr16:69360816-69373570:- -0.36 -6.4 3.72E-10 Box Plot
THCA rs6713259 chr2:42440750 A/G C19orf43 chr19:12841454-12845589:- -0.2 -6.59 1.14E-10 Box Plot
THCA rs6713259 chr2:42440750 A/G ZNF771 chr16:30418618-30442429:+ -0.28 -6.02 3.55E-9 Box Plot
THCA rs6714042 chr2:132196171 C/G CCDC74B chr2:130896860-130902707:- 0.37 6.7 5.8E-11 Box Plot
THCA rs6714329 chr2:132234784 G/A TUBA3E chr2:130949316-130956034:- 0.53 6.19 1.33E-9 Box Plot
THCA rs67146188 chr8:11782433 A/G SGK223 chr8:8175258-8244008:- 0.36 6.67 6.91E-11 Box Plot